BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F01SP1|AL425889
(807 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1578 0.0
>3x_Contig1264
Length = 6524
Score = 1578 bits (796), Expect = 0.0
Identities = 806/808 (99%), Gaps = 1/808 (0%)
Strand = Plus / Plus
Query: 1 ataaacttatctacattttcttgcaatgtccatacctgagctagatctgttgggatatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1536 ataaacttatctacattttcttgcaatgtccatacctgagctagatctgttgggatatta 1595
Query: 61 tcagatggtagtaaagcacctaaaggtgttggtttcactctcgttttccaaagattttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1596 tcagatggtagtaaagcacctaaaggtgttggtttcactctcgttttccaaagattttca 1655
Query: 121 atctttagaagtttattgatatcatcgacgaacaatttctttaaaatatctgtgattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1656 atctttagaagtttattgatatcatcgacgaacaatttctttaaaatatctgtgattttc 1715
Query: 181 gtctcatcgccggacttgactaactgctggagagcatgtaattcgttagtctcctctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1716 gtctcatcgccggacttgactaactgctggagagcatgtaattcgttagtctcctctttg 1775
Query: 241 atgcgggcgatttcttctttatcatcagtacctaaatcttgatcatttacggtctcttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1776 atgcgggcgatttcttctttatcatcagtacctaaatcttgatcatttacggtctcttct 1835
Query: 301 gaggattctgcaaaaagttggccaaataggaaattcttggcccaaaccacacagtggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1836 gaggattctgcaaaaagttggccaaataggaaattcttggcccaaaccacacagtggctt 1895
Query: 361 ggctgtgatggcgtggatctaatggtacagaccgggaacgtagttggtgtctccttagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1896 ggctgtgatggcgtggatctaatggtacagaccgggaacgtagttggtgtctccttagtg 1955
Query: 421 gtgcaatcaaagcattcagtgacacttgggaagattggctgtatgtatccatcgaatccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1956 gtgcaatcaaagcattcagtgacacttgggaagattggctgtatgtatccatcgaatccc 2015
Query: 481 gaagtcccagattcgatcaaaggtttattagtgaactgacacatcttattgacgtatctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2016 gaagtcccagattcgatcaaaggtttattagtgaactgacacatcttattgacgtatctt 2075
Query: 541 cttgccgctagattgtccaatgcattgtatataatcgaaaactgatcaaaccacgaaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2076 cttgccgctagattgtccaatgcattgtatataatcgaaaactgatcaaaccacgaaagt 2135
Query: 601 -ggaacttttctgtatccatgatattattctgatatgaaactagtttagagttgctgaac 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2136 gggaacttttctgtatccatgatattattctgatatgaaactagtttagagttgctgaac 2195
Query: 660 ctttgaactgctttcattgcagtattacttttaggttgtttaatatctctcttcctaaat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2196 ctttgaactgctttcattgcagtattacttttaggttgtttaatatctctcttcctaaat 2255
Query: 720 aaaaactgtctgttcaaattcgataaatcaatagtgtccaaatcaacgatatggatttca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2256 aaaaactgtctgttcaaattcgataaatcaatagtgtccaaatcaacgatatggatttca 2315
Query: 780 cctatttccaacaaaatcaaatccttca 807
||||||||||||||||||||||||||||
Sbjct: 2316 cctatttccaacaaaatcaaatccttca 2343
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6826
Number of Sequences: 1807
Number of extensions: 6826
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 807
length of database: 10,358,551
effective HSP length: 16
effective length of query: 791
effective length of database: 10,329,639
effective search space: 8170744449
effective search space used: 8170744449
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)